BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B09LP1|AL425987
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1676 1547 0.0
>3x_Contig1676
Length = 15800
Score = 1547 bits (779), Expect = 0.0
Identities = 787/791 (99%)
Strand = Plus / Plus
Query: 1 gatcctcgaaagagtaaaaccttaatcggagctttacaggttttctagtgatatttgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1869 gatcctcgaaagagtaaaaccttaatcggagctttacaggttttctagtgatatttgccg 1928
Query: 61 agagaagtgtaaaacatgttgacaatcataaaagaagagtacatgtgcacattcacaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1929 agagaagtgtaaaacatgttgacaatcataaaagaagagtacatgtgcacattcacaggt 1988
Query: 121 ctaaagttcttagggtatcaaaaaaaaaaaaaacatttcgacaaagctggagcaacataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1989 ctaaagttcttagggtatcaaaaaaaaaaaaaacatttcgacaaagctggagcaacataa 2048
Query: 181 tctcacttgttcttagacttctttcatactgatctgtaacgcggtttctggaacttgacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2049 tctcacttgttcttagacttctttcatactgatctgtaacgcggtttctggaacttgacc 2108
Query: 241 gctagagaattccttctatggtgatgatttgtgcatggagaagacaaatcgagtgaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2109 gctagagaattccttctatggtgatgatttgtgcatggagaagacaaatcgagtgaacat 2168
Query: 301 tgcgaagaatcatcttcagtgcatttggtggggaaatcgatcttgcatgcgtgcattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2169 tgcgaagaatcatcttcagtgcatttggtggggaaatcgatcttgcatgcgtgcattgaa 2228
Query: 361 ttccttggagaaacaggttgtttttcagtaatggaccttgattcagaaggcgaattgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2229 ttccttggagaaacaggttgtttttcagtaatggaccttgattcagaaggcgaattgcta 2288
Query: 421 ttgtattcgtcattatagtcgtaatcgtaattgtagtcgtaatattcattgctagttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2289 ttgtattcgtcattatagtcgtaatcgtaattgtagtcgtaatattcattgctagttttt 2348
Query: 481 tgcttgtcatcattatcctgattgtccgctagagtwagcgaacctgtattttcagagtaa 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2349 tgcttgtcatcattatcctgattgtccgctagagttagcgaacctgtattttcagagtaa 2408
Query: 541 ctggtattatctacactgttctccatgctataatgctttctgaaggggttttctggggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 ctggtattatctacactgttctccatgctataatgctttctgaaggggttttctggggta 2468
Query: 601 aattcagacgtctctgactccattaacgtaggtaacacctcagaaccaaaacccaagcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 aattcagacgtctctgactccattaacgtaggtaacacctcagaaccaaaacccaagcca 2528
Query: 661 gcacttgagcaagaagccgttcttcttgaccgacacttgagcgaaggacttgacaatgtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2529 gcacttgagcaagaagccgttcttcttgaccgacacttgagcgaaggacttgacaatgtg 2588
Query: 721 gattctgatgcgggacstgggattgaattctggtgatgcccctgctgttgttcgcgtaac 780
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 gattctgatgcgggacgctggattgaattctggtgatgcccctgctgttgttcgcgtaac 2648
Query: 781 tctagataatg 791
|||||||||||
Sbjct: 2649 tctagataatg 2659
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,260
Number of Sequences: 1807
Number of extensions: 13260
Number of successful extensions: 322
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)